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fingerprinting servers--md5deep problem

Subject: fingerprinting servers--md5deep problem
Date: Wed, 6 Apr 2005 16:42:11 -0700 (PDT)
I'm attempting to get a fingerprint of servers prior to putting them
into production (ports and file hashes) for use later if the servers
are compromised. 

For file hashes I'm using md5deep on linux over an smbmount to a
windows server and keep running into this message on several files: 

md5deep: WINNT/system32/config/default: error at offset 2138112: Text
file busy

My command line is (from the mount point of the smb share): 
smbmount# md5deep -r -l -of WINNT/* >> output.md5deep.txt

Seems like it's hitting files that the server is changing or has
locked. How do I work around this? 

Thanks, 

Jeff.

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